Map Trait Coverage Per Site — fb_map_site_traits

Returns a ggplot2 map of sites colored by trait coverage (proportion of species having a known trait value). By default shows one plot for each trait and add an additional facet named "all_traits" considering the trait coverage with all traits taken together.

Usage

fb_map_site_traits_completeness(
  site_locations,
  site_species,
  species_traits,
  all_traits = TRUE
)

Arguments

site_locations: an sf object with the spatial geometries of sites. NOTE: the first column should be named "site" and indicate site names.
site_species: a data.frame with sites in rows and species in columns. NOTE: the first column should be named "site" and indicate site names. The other columns should be named according to species names.
species_traits: a data.frame with species in rows and traits as columns. NOTE: The first column should be named "species" and contain species names. The other columns should be named according to trait names.
all_traits: a logical (default = TRUE) which tell if the coverage considering all provided traits should be provided in an additional column all_traits

Value

a 'ggplot2' object

Examples

fb_map_site_traits_completeness(site_locations, site_species, species_traits)