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Plot Number of Species per Trait

Source: R/fb_plot_number_species_by_trait.R
fb_plot_number_species_by_trait.Rd

Display a lollipop graph showing the number and proportion of species with non-NA trait for each trait ranked in decreasing order.

Usage

fb_plot_number_species_by_trait(
  species_traits,
  species_categories = NULL,
  threshold_species_proportion = NULL
)

Arguments

species_traits

a data.frame with species in rows and traits as columns. NOTE: The first column should be named "species" and contain species names. The other columns should be named according to trait names.

species_categories

(default = NULL) 2-columns data.frame giving species categories, with the first column describing the species name, and the second column giving their corresponding categories

threshold_species_proportion

numeric(1) [default = NULL]
between 0 and 1. The percentage of species coverage threshold.

Value

a ggplot2 object

Examples

data(species_traits)

fb_plot_number_species_by_trait(species_traits)


# Add a vertical cutoff line (12.5% of species)
fb_plot_number_species_by_trait(species_traits, NULL, 1/8)