Function reference • popbayes

Datasets

garamba: African mammals survey in the Garamba National Park

species_info: Species information dataset

Main functions

format_data(): Format count series

filter_series(): Extract the count series corresponding to a location and/or a species

plot_series(): Plot original vs converted counts

fit_trend(): Fit a Bayesian model to estimate population size trend

diagnostic(): Check if a BUGS model has converged

plot_trend(): Plot estimated population trend

Additional functions

list_series(): Retrieve the count series names

read_series(): Import a list of count series previously exported

series_to_df(): Extract original/converted count series data from a list

read_bugs(): Import a list of BUGS outputs previously exported

bugs_to_df(): Extract estimated parameters from a list of BUGS outputs

w_to_rmax(): Compute rmax from adult female body mass